HL_6W6L_036

3D structure

PDB id

6W6L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human ribosome-TMCO1 translocon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.84 Å

Loop

Sequence

UAUAGACUGCCGAA

Length

14 nucleotides

Bulged bases

6W6L|1|t|A|1941

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6W6L|1|t|U|1938
6W6L|1|t|A|1939
6W6L|1|t|U|1940
6W6L|1|t|A|1941
6W6L|1|t|G|1942
6W6L|1|t|A|1943
6W6L|1|t|C|2000
6W6L|1|t|U|2001
6W6L|1|t|G|2002
6W6L|1|t|C|2003
6W6L|1|t|C|2004
6W6L|1|t|G|2005
6W6L|1|t|A|2006
6W6L|1|t|A|2007

Current chains

Chain t

28S ribosomal RNA

Nearby chains

Chain J

60S ribosomal protein L9