HL_6W6L_043
3D structure
- PDB id
- 6W6L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human ribosome-TMCO1 translocon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.84 Å
Loop
- Sequence
- GUUCAGAUCC
- Length
- 10 nucleotides
- Bulged bases
- 6W6L|1|t|U|2509, 6W6L|1|t|C|2510
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6W6L_043 not in the Motif Atlas
- Homologous match to HL_5TBW_035
- Geometric discrepancy: 0.1689
- The information below is about HL_5TBW_035
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_35087.1
- Basepair signature
- cWW-tWH-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
6W6L|1|t|G|2502
6W6L|1|t|U|2503
6W6L|1|t|U|2504
6W6L|1|t|C|2505
6W6L|1|t|A|2506
6W6L|1|t|G|2507
6W6L|1|t|A|2508
6W6L|1|t|U|2509
6W6L|1|t|C|2510
6W6L|1|t|C|2511
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain 1
- Protein transport protein Sec61 subunit alpha isoform 1
- Chain S
- 60S ribosomal protein L19
- Chain Y
- 60S ribosomal protein L23a
- Chain h
- 60S ribosomal protein L34
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