HL_6W6L_046
3D structure
- PDB id
- 6W6L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human ribosome-TMCO1 translocon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.84 Å
Loop
- Sequence
- GUUCUCUUU
- Length
- 9 nucleotides
- Bulged bases
- 6W6L|1|t|U|2610
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6W6L_046 not in the Motif Atlas
- Homologous match to HL_8C3A_037
- Geometric discrepancy: 0.2772
- The information below is about HL_8C3A_037
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_01927.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
6W6L|1|t|G|2603
6W6L|1|t|U|2604
6W6L|1|t|U|2605
6W6L|1|t|C|2606
6W6L|1|t|U|2607
6W6L|1|t|C|2608
6W6L|1|t|U|2609
6W6L|1|t|U|2610
6W6L|1|t|U|2611
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain S
- 60S ribosomal protein L19
- Chain V
- 60S ribosomal protein L22
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