HL_6W6L_061

3D structure

PDB id

6W6L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human ribosome-TMCO1 translocon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.84 Å

Loop

Sequence

GGCGAGCCCGAGGGGCUCUC

Length

20 nucleotides

Bulged bases

6W6L|1|t|C|4066

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6W6L|1|t|G|4064
6W6L|1|t|G|4065
6W6L|1|t|C|4066
6W6L|1|t|G|4067
6W6L|1|t|A|4068
6W6L|1|t|G|4069
6W6L|1|t|C|4070
6W6L|1|t|C|4071
6W6L|1|t|C|4072
6W6L|1|t|G|4073
6W6L|1|t|A|4074
6W6L|1|t|G|4075
6W6L|1|t|G|4076
6W6L|1|t|G|4077
6W6L|1|t|G|4078
6W6L|1|t|C|4079
6W6L|1|t|U|4080
6W6L|1|t|C|4081
6W6L|1|t|U|4082
6W6L|1|t|C|4083

Current chains

Chain t

28S ribosomal RNA

Nearby chains

Chain A

60S ribosomal protein L8

Chain I

60S ribosomal protein L7a

Chain h

60S ribosomal protein L34