HL_6W6P_011

3D structure

PDB id

6W6P (explore in PDB, NAKB, or RNA 3D Hub)

Description

MultiBody Refinement of 70S Ribosome from Enterococcus faecalis

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UAAAG

Length

5 nucleotides

Bulged bases

6W6P|1|A|A|358, 6W6P|1|A|A|359

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6W6P_011 not in the Motif Atlas

Homologous match to HL_4WF9_011

Geometric discrepancy: 0.1693

The information below is about HL_4WF9_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.9

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

6W6P|1|A|U|356
6W6P|1|A|A|357
6W6P|1|A|A|358
6W6P|1|A|A|359
6W6P|1|A|G|360

Current chains

Chain A

23S rRNA

Nearby chains

Chain E

50S ribosomal protein L4