HL_6W6P_021

3D structure

PDB id

6W6P (explore in PDB, NAKB, or RNA 3D Hub)

Description

MultiBody Refinement of 70S Ribosome from Enterococcus faecalis

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UGAAUAG

Length

7 nucleotides

Bulged bases

6W6P|1|A|U|684

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6W6P_021 not in the Motif Atlas

Homologous match to HL_7RQB_021

Geometric discrepancy: 0.1333

The information below is about HL_7RQB_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_35490.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

299

Unit IDs

6W6P|1|A|U|680
6W6P|1|A|G|681
6W6P|1|A|A|682
6W6P|1|A|A|683
6W6P|1|A|U|684
6W6P|1|A|A|685
6W6P|1|A|G|686

Current chains

Chain A

23S rRNA

Nearby chains

Chain 3

50S ribosomal protein L33

Chain 5

50S ribosomal protein L35