HL_6W6P_024

3D structure

PDB id

6W6P (explore in PDB, NAKB, or RNA 3D Hub)

Description

MultiBody Refinement of 70S Ribosome from Enterococcus faecalis

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AGAAAUU

Length

7 nucleotides

Bulged bases

6W6P|1|A|A|821

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6W6P_024 not in the Motif Atlas

Homologous match to HL_4WF9_024

Geometric discrepancy: 0.125

The information below is about HL_4WF9_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_79773.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

8

Unit IDs

6W6P|1|A|A|819
6W6P|1|A|G|820
6W6P|1|A|A|821
6W6P|1|A|A|822
6W6P|1|A|A|823
6W6P|1|A|U|824
6W6P|1|A|U|825

Current chains

Chain A

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L2