HL_6W6P_028

3D structure

PDB id

6W6P (explore in PDB, NAKB, or RNA 3D Hub)

Description

MultiBody Refinement of 70S Ribosome from Enterococcus faecalis

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GAAACAGC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6W6P_028 not in the Motif Atlas

Homologous match to HL_5J7L_160

Geometric discrepancy: 0.1216

The information below is about HL_5J7L_160

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_42998.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

6W6P|1|A|G|1018
6W6P|1|A|A|1019
6W6P|1|A|A|1020
6W6P|1|A|A|1021
6W6P|1|A|C|1022
6W6P|1|A|A|1023
6W6P|1|A|G|1024
6W6P|1|A|C|1025

Current chains

Chain A

23S rRNA

Nearby chains

Chain 0

50S ribosomal protein L30

Chain R

50S ribosomal protein L20