HL_6W6P_035

3D structure

PDB id

6W6P (explore in PDB, NAKB, or RNA 3D Hub)

Description

MultiBody Refinement of 70S Ribosome from Enterococcus faecalis

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUUGAUAUUC

Length

10 nucleotides

Bulged bases

6W6P|1|A|U|1432, 6W6P|1|A|U|1433

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6W6P_035 not in the Motif Atlas

Homologous match to HL_5J7L_168

Geometric discrepancy: 0.1121

The information below is about HL_5J7L_168

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81545.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

7

Unit IDs

6W6P|1|A|G|1425
6W6P|1|A|U|1426
6W6P|1|A|U|1427
6W6P|1|A|G|1428
6W6P|1|A|A|1429
6W6P|1|A|U|1430
6W6P|1|A|A|1431
6W6P|1|A|U|1432
6W6P|1|A|U|1433
6W6P|1|A|C|1434

Current chains

Chain A

23S rRNA

Nearby chains

Chain U

50S ribosomal protein L23