3D structure

PDB id
6W6P (explore in PDB, NAKB, or RNA 3D Hub)
Description
MultiBody Refinement of 70S Ribosome from Enterococcus faecalis
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
GGUUGGAAAUC
Length
11 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6W6P_054 not in the Motif Atlas
Homologous match to HL_7RQB_055
Geometric discrepancy: 0.2059
The information below is about HL_7RQB_055
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_11805.3
Basepair signature
cWW-F-F-F-F-F-F-F-F-F
Number of instances in this motif group
3

Unit IDs

6W6P|1|A|G|2317
6W6P|1|A|G|2318
6W6P|1|A|U|2319
6W6P|1|A|U|2320
6W6P|1|A|G|2321
6W6P|1|A|G|2322
6W6P|1|A|A|2323
6W6P|1|A|A|2324
6W6P|1|A|A|2325
6W6P|1|A|U|2326
6W6P|1|A|C|2327

Current chains

Chain A
23S rRNA

Nearby chains

Chain F
50S ribosomal protein L5

Coloring options:


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