HL_6W6P_068

3D structure

PDB id

6W6P (explore in PDB, NAKB, or RNA 3D Hub)

Description

MultiBody Refinement of 70S Ribosome from Enterococcus faecalis

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AGUGAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6W6P_068 not in the Motif Atlas

Homologous match to HL_7A0S_068

Geometric discrepancy: 0.0968

The information below is about HL_7A0S_068

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.5

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

428

Unit IDs

6W6P|1|A|A|2867
6W6P|1|A|G|2868
6W6P|1|A|U|2869
6W6P|1|A|G|2870
6W6P|1|A|A|2871
6W6P|1|A|U|2872

Current chains

Chain A

23S rRNA

Nearby chains