HL_6W6P_074

3D structure

PDB id

6W6P (explore in PDB, NAKB, or RNA 3D Hub)

Description

MultiBody Refinement of 70S Ribosome from Enterococcus faecalis

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGCAUG

Length

6 nucleotides

Bulged bases

6W6P|1|a|C|201

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6W6P_074 not in the Motif Atlas

Geometric match to HL_5NFV_001

Geometric discrepancy: 0.2385

The information below is about HL_5NFV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.4

Basepair signature

cWW-F

Number of instances in this motif group

7

Unit IDs

6W6P|1|a|C|199
6W6P|1|a|G|200
6W6P|1|a|C|201
6W6P|1|a|A|202
6W6P|1|a|U|203
6W6P|1|a|G|204

Current chains

Chain a

16S rRNA

Nearby chains

Chain q

30S ribosomal protein S17