HL_6W6P_081

3D structure

PDB id

6W6P (explore in PDB, NAKB, or RNA 3D Hub)

Description

MultiBody Refinement of 70S Ribosome from Enterococcus faecalis

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UUUCGG

Length

6 nucleotides

Bulged bases

6W6P|1|a|U|436

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6W6P_081 not in the Motif Atlas

Homologous match to HL_5J7L_011

Geometric discrepancy: 0.1883

The information below is about HL_5J7L_011

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

6W6P|1|a|U|434
6W6P|1|a|U|435
6W6P|1|a|U|436
6W6P|1|a|C|437
6W6P|1|a|G|438
6W6P|1|a|G|439

Current chains

Chain a

16S rRNA

Nearby chains

Chain d

30S ribosomal protein S4