HL_6W6P_103

3D structure

PDB id

6W6P (explore in PDB, NAKB, or RNA 3D Hub)

Description

MultiBody Refinement of 70S Ribosome from Enterococcus faecalis

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AGCUUGCU

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6W6P_103 not in the Motif Atlas

Geometric match to HL_1KH6_003

Geometric discrepancy: 0.3203

The information below is about HL_1KH6_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_33487.2

Basepair signature

cWW-cWW

Number of instances in this motif group

3

Unit IDs

6W6P|1|A|A|282
6W6P|1|A|G|283
6W6P|1|A|C|284
6W6P|1|A|U|285
6W6P|1|A|U|286
6W6P|1|A|G|287
6W6P|1|A|C|288
6W6P|1|A|U|289

Current chains

Chain A

23S rRNA

Nearby chains