HL_6W77_022

3D structure

PDB id

6W77 (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S-Inactivated-high-Mg2+ Class A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

AGAGAU

Length

6 nucleotides

Bulged bases

6W77|1|A|A|1014

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6W77_022 not in the Motif Atlas

Homologous match to HL_4LFB_022

Geometric discrepancy: 0.5695

The information below is about HL_4LFB_022

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

397

Unit IDs

6W77|1|A|A|1012
6W77|1|A|G|1013
6W77|1|A|A|1014
6W77|1|A|G|1015
6W77|1|A|A|1016
6W77|1|A|U|1017

Current chains

Chain A

RNA (1519-MER)

Nearby chains

Chain N

30S ribosomal protein S14

Chain S

30S ribosomal protein S19