HL_6W77_025

3D structure

PDB id

6W77 (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S-Inactivated-high-Mg2+ Class A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUUAAGUCC

Length

9 nucleotides

Bulged bases

6W77|1|A|G|1094

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6W77_025 not in the Motif Atlas

Geometric match to HL_4WF9_039

Geometric discrepancy: 0.3748

The information below is about HL_4WF9_039

Detailed Annotation

GNRA with extra cWW

Broad Annotation

GNRA with extra cWW

Motif group

HL_87268.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

15

Unit IDs

6W77|1|A|G|1089
6W77|1|A|U|1090
6W77|1|A|U|1091
6W77|1|A|A|1092
6W77|1|A|A|1093
6W77|1|A|G|1094
6W77|1|A|U|1095
6W77|1|A|C|1096
6W77|1|A|C|1097

Current chains

Chain A

RNA (1519-MER)

Nearby chains