HL_6W7M_025

3D structure

PDB id

6W7M (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S-Inactive-high-Mg2+ + carbon layer

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGUUAAGUCC

Length

10 nucleotides

Bulged bases

6W7M|1|A|A|1092, 6W7M|1|A|G|1094

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6W7M_025 not in the Motif Atlas

Geometric match to HL_6CF2_001

Geometric discrepancy: 0.3762

The information below is about HL_6CF2_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_87553.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

6W7M|1|A|G|1088
6W7M|1|A|G|1089
6W7M|1|A|U|1090
6W7M|1|A|U|1091
6W7M|1|A|A|1092
6W7M|1|A|A|1093
6W7M|1|A|G|1094
6W7M|1|A|U|1095
6W7M|1|A|C|1096
6W7M|1|A|C|1097

Current chains

Chain A

16S rRNA

Nearby chains

Chain B

30S ribosomal protein S2

Chain G

30S ribosomal protein S7