HL_6W7N_017

3D structure

PDB id

6W7N (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S-Inactive-low-Mg2+ Class A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CCUUGAG

Length

7 nucleotides

Bulged bases

6W7N|1|A|U|842

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6W7N_017 not in the Motif Atlas

Geometric match to HL_4WF9_009

Geometric discrepancy: 0.3252

The information below is about HL_4WF9_009

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81100.2

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

6W7N|1|A|C|840
6W7N|1|A|C|841
6W7N|1|A|U|842
6W7N|1|A|U|843
6W7N|1|A|G|844
6W7N|1|A|A|845
6W7N|1|A|G|846

Current chains

Chain A

16S rRNA

Nearby chains