HL_6W7W_012

3D structure

PDB id

6W7W (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S-Inactive-low-Mg2+ Class B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

6W7W|1|2|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6W7W_012 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.2006

The information below is about HL_5J7L_012

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

6W7W|1|2|G|462
6W7W|1|2|U|463
6W7W|1|2|U|464
6W7W|1|2|A|465
6W7W|1|2|A|466
6W7W|1|2|U|467
6W7W|1|2|A|468
6W7W|1|2|C|469
6W7W|1|2|C|470

Current chains

Chain 2

16S rRNA

Nearby chains