HL_6WD0_075

3D structure

PDB id

6WD0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCUUCGGG

Length

8 nucleotides

Bulged bases

6WD0|1|3|U|209

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WD0_075 not in the Motif Atlas

Homologous match to HL_6CZR_076

Geometric discrepancy: 0.5041

The information below is about HL_6CZR_076

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_34168.3

Basepair signature

cWW-cWW-F

Number of instances in this motif group

11

Unit IDs

6WD0|1|3|C|206
6WD0|1|3|C|207
6WD0|1|3|U|208
6WD0|1|3|U|209
6WD0|1|3|C|210
6WD0|1|3|G|211
6WD0|1|3|G|212
6WD0|1|3|G|213

Current chains

Chain 3

16S ribosomal RNA

Nearby chains