HL_6WD1_104
3D structure
- PDB id
- 6WD1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GGUUCAAAUCC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6WD1_104 not in the Motif Atlas
- Homologous match to HL_5EL4_223
- Geometric discrepancy: 0.3873
- The information below is about HL_5EL4_223
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_23827.3
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
6WD1|1|5|G|52
6WD1|1|5|G|53
6WD1|1|5|U|54
6WD1|1|5|U|55
6WD1|1|5|C|56
6WD1|1|5|A|57
6WD1|1|5|A|58
6WD1|1|5|A|59
6WD1|1|5|U|60
6WD1|1|5|C|61
6WD1|1|5|C|62
Current chains
- Chain 5
- tRNAfMet
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain a
- 50S ribosomal protein L1
Coloring options: