HL_6WD3_030
3D structure
- PDB id
- 6WD3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-B1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CUGUGAGG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6WD3_030 not in the Motif Atlas
- Geometric match to HL_2ZZM_002
- Geometric discrepancy: 0.2211
- The information below is about HL_2ZZM_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_13963.3
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 4
Unit IDs
6WD3|1|1|C|1221
6WD3|1|1|U|1222
6WD3|1|1|G|1223
6WD3|1|1|U|1224
6WD3|1|1|G|1225
6WD3|1|1|A|1226
6WD3|1|1|G|1227
6WD3|1|1|G|1228
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain l
- 50S ribosomal protein L15
- Chain q
- 50S ribosomal protein L20
- Chain r
- 50S ribosomal protein L21
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