HL_6WD8_085
3D structure
- PDB id
- 6WD8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CGGUGAAAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6WD8_085 not in the Motif Atlas
- Homologous match to HL_5J7L_015
- Geometric discrepancy: 0.1122
- The information below is about HL_5J7L_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
6WD8|1|3|C|689
6WD8|1|3|G|690
6WD8|1|3|G|691
6WD8|1|3|U|692
6WD8|1|3|G|693
6WD8|1|3|A|694
6WD8|1|3|A|695
6WD8|1|3|A|696
6WD8|1|3|U|697
6WD8|1|3|G|698
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain 4
- mRNA
- Chain 6
- Transfer RNA; tRNA
- Chain L
- 30S ribosomal protein S7
- Chain P
- 30S ribosomal protein S11
- Chain Z
- 30S ribosomal protein S21
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