HL_6WDB_027

3D structure

PDB id

6WDB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure IV-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

6WDB|1|1|U|1066, 6WDB|1|1|A|1070

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WDB|1|1|C|1064
6WDB|1|1|U|1065
6WDB|1|1|U|1066
6WDB|1|1|A|1067
6WDB|1|1|G|1068
6WDB|1|1|A|1069
6WDB|1|1|A|1070
6WDB|1|1|G|1071
6WDB|1|1|C|1072
6WDB|1|1|A|1073
6WDB|1|1|G|1074

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain i

50S ribosomal protein L11