HL_6WDB_108
3D structure
- PDB id
- 6WDB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure IV-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- CAGUCGGUAG
- Length
- 10 nucleotides
- Bulged bases
- 6WDB|1|7|U|16, 6WDB|1|7|C|17, 6WDB|1|7|G|18, 6WDB|1|7|G|19, 6WDB|1|7|U|20
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6WDB_108 not in the Motif Atlas
- Homologous match to HL_3WFS_001
- Geometric discrepancy: 0.2049
- The information below is about HL_3WFS_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6WDB|1|7|C|13
6WDB|1|7|A|14
6WDB|1|7|G|15
6WDB|1|7|U|16
6WDB|1|7|C|17
6WDB|1|7|G|18
6WDB|1|7|G|19
6WDB|1|7|U|20
6WDB|1|7|A|21
6WDB|1|7|G|22
Current chains
- Chain 7
- tRNAPhe
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: