HL_6WDB_113
3D structure
- PDB id
- 6WDB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure IV-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- UUUGAUCAUGG
- Length
- 11 nucleotides
- Bulged bases
- 6WDB|1|3|U|14
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6WDB_113 not in the Motif Atlas
- Homologous match to HL_5J7L_001
- Geometric discrepancy: 0.1123
- The information below is about HL_5J7L_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_89881.5
- Basepair signature
- cWW-tHW-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
6WDB|1|3|U|12
6WDB|1|3|U|13
6WDB|1|3|U|14
6WDB|1|3|G|15
6WDB|1|3|A|16
6WDB|1|3|U|17
6WDB|1|3|C|18
6WDB|1|3|A|19
6WDB|1|3|U|20
6WDB|1|3|G|21
6WDB|1|3|G|22
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain J
- 30S ribosomal protein S5
- Chain Q
- 30S ribosomal protein S12
Coloring options: