HL_6WDC_063
3D structure
- PDB id
- 6WDC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure IV-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- CGAGAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6WDC_063 not in the Motif Atlas
- Geometric match to HL_5Y7M_002
- Geometric discrepancy: 0.1875
- The information below is about HL_5Y7M_002
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.8
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 352
Unit IDs
6WDC|1|1|C|2658
6WDC|1|1|G|2659
6WDC|1|1|A|2660
6WDC|1|1|G|2661
6WDC|1|1|A|2662
6WDC|1|1|G|2663
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain f
- 50S ribosomal protein L6
Coloring options: