HL_6WDG_106
3D structure
- PDB id
- 6WDG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- AUUGAAAAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6WDG_106 not in the Motif Atlas
- Homologous match to HL_6ORD_036
- Geometric discrepancy: 0.2298
- The information below is about HL_6ORD_036
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.2
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 47
Unit IDs
6WDG|1|7|A|31
6WDG|1|7|U|32
6WDG|1|7|U|33
6WDG|1|7|G|34
6WDG|1|7|A|35
6WDG|1|7|A|36
6WDG|1|7|A|37
6WDG|1|7|A|38
6WDG|1|7|U|39
Current chains
- Chain 7
- tRNAPhe
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain 3
- Small subunit ribosomal RNA; SSU rRNA
- Chain 4
- mRNA
- Chain Q
- 30S ribosomal protein S12
Coloring options: