HL_6WNT_052

3D structure

PDB id

6WNT (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit without free 5S rRNA and perturbed PTC

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UGGACGCCAGUCUG

Length

14 nucleotides

Bulged bases

6WNT|1|4|C|2273, 6WNT|1|4|C|2274, 6WNT|1|4|A|2275

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WNT|1|4|U|2267
6WNT|1|4|G|2268
6WNT|1|4|G|2269
6WNT|1|4|A|2270
6WNT|1|4|C|2271
6WNT|1|4|G|2272
6WNT|1|4|C|2273
6WNT|1|4|C|2274
6WNT|1|4|A|2275
6WNT|1|4|G|2276
6WNT|1|4|U|2277
6WNT|1|4|C|2278
6WNT|1|4|U|2279
6WNT|1|4|G|2280

Current chains

Chain 4

23s-5s joint ribosomal RNA

Nearby chains

Chain a

50S ribosomal protein L1