HL_6WNT_063

3D structure

PDB id

6WNT (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit without free 5S rRNA and perturbed PTC

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUGUUCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WNT_063 not in the Motif Atlas

Geometric match to HL_5TBW_063

Geometric discrepancy: 0.2195

The information below is about HL_5TBW_063

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_36430.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

6WNT|1|4|C|2679
6WNT|1|4|U|2680
6WNT|1|4|G|2681
6WNT|1|4|U|2682
6WNT|1|4|U|2683
6WNT|1|4|C|2684
6WNT|1|4|G|2685

Current chains

Chain 4

23s-5s joint ribosomal RNA

Nearby chains