HL_6WNT_066

3D structure

PDB id

6WNT (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit without free 5S rRNA and perturbed PTC

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UGCCAA

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WNT_066 not in the Motif Atlas

Geometric match to HL_5J7L_198

Geometric discrepancy: 0.1474

The information below is about HL_5J7L_198

Detailed Annotation

Ribsomal LSU H95

Broad Annotation

Ribsomal LSU H95

Motif group

HL_65794.5

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

14

Unit IDs

6WNT|1|4|U|2829
6WNT|1|4|G|2830
6WNT|1|4|C|2831
6WNT|1|4|C|2832
6WNT|1|4|A|2833
6WNT|1|4|A|2834

Current chains

Chain 4

23s-5s joint ribosomal RNA

Nearby chains

Chain n

50S ribosomal protein L17