HL_6WNV_055
3D structure
- PDB id
- 6WNV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome without free 5S rRNA and with a perturbed PTC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CAUCCCG
- Length
- 7 nucleotides
- Bulged bases
- 6WNV|1|4|U|887, 6WNV|1|4|C|888, 6WNV|1|4|C|889
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6WNV_055 not in the Motif Atlas
- Geometric match to HL_2CZJ_007
- Geometric discrepancy: 0.2986
- The information below is about HL_2CZJ_007
- Detailed Annotation
- UNCG variation
- Broad Annotation
- UNCG variation
- Motif group
- HL_23696.2
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 8
Unit IDs
6WNV|1|4|C|885
6WNV|1|4|A|886
6WNV|1|4|U|887
6WNV|1|4|C|888
6WNV|1|4|C|889
6WNV|1|4|C|890
6WNV|1|4|G|891
Current chains
- Chain 4
- 23s-5s joint ribosomal RNA
Nearby chains
- Chain 3
- Small subunit ribosomal RNA; SSU rRNA
- Chain R
- 30S ribosomal protein S13
- Chain X
- 30S ribosomal protein S19
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