HL_6WNV_075

3D structure

PDB id

6WNV (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome without free 5S rRNA and with a perturbed PTC

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CCUCGCG

Length

7 nucleotides

Bulged bases

6WNV|1|4|U|1857, 6WNV|1|4|C|1858, 6WNV|1|4|C|1860

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WNV_075 not in the Motif Atlas

Geometric match to HL_4V88_198

Geometric discrepancy: 0.2714

The information below is about HL_4V88_198

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

6WNV|1|4|C|1855
6WNV|1|4|C|1856
6WNV|1|4|U|1857
6WNV|1|4|C|1858
6WNV|1|4|G|1859
6WNV|1|4|C|1860
6WNV|1|4|G|1861

Current chains

Chain 4

23s-5s joint ribosomal RNA

Nearby chains