HL_6WNW_005

3D structure

PDB id

6WNW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CCUUCGGG

Length

8 nucleotides

Bulged bases

6WNW|1|3|U|209, 6WNW|1|3|C|210

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WNW_005 not in the Motif Atlas

Geometric match to HL_2Y9H_005

Geometric discrepancy: 0.3963

The information below is about HL_2Y9H_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_86870.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

6WNW|1|3|C|206
6WNW|1|3|C|207
6WNW|1|3|U|208
6WNW|1|3|U|209
6WNW|1|3|C|210
6WNW|1|3|G|211
6WNW|1|3|G|212
6WNW|1|3|G|213

Current chains

Chain 3

16S ribosomal RNA

Nearby chains