HL_6WNW_011

3D structure

PDB id

6WNW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

6WNW|1|3|U|421, 6WNW|1|3|C|422

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WNW_011 not in the Motif Atlas

Geometric match to HL_4V88_198

Geometric discrepancy: 0.2116

The information below is about HL_4V88_198

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

6WNW|1|3|C|419
6WNW|1|3|U|420
6WNW|1|3|U|421
6WNW|1|3|C|422
6WNW|1|3|G|423
6WNW|1|3|G|424

Current chains

Chain 3

16S ribosomal RNA

Nearby chains

Chain H

30S ribosomal protein S3

Chain I

30S ribosomal protein S4