HL_6WNW_058

3D structure

PDB id

6WNW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GAAACAAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WNW_058 not in the Motif Atlas

Geometric match to HL_5TBW_006

Geometric discrepancy: 0.1544

The information below is about HL_5TBW_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

6WNW|1|4|G|978
6WNW|1|4|A|979
6WNW|1|4|A|980
6WNW|1|4|A|981
6WNW|1|4|C|982
6WNW|1|4|A|983
6WNW|1|4|A|984
6WNW|1|4|C|985

Current chains

Chain 4

23s-5s joint ribosomal RNA

Nearby chains

Chain q

50S ribosomal protein L20

Chain r

50S ribosomal protein L21

Chain z

50S ribosomal protein L30