HL_6WNW_078
3D structure
- PDB id
- 6WNW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UUUAUUAAAAA
- Length
- 11 nucleotides
- Bulged bases
- 6WNW|1|4|A|1908, 6WNW|1|4|U|1909, 6WNW|1|4|U|1910, 6WNW|1|4|A|1914
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6WNW_078 not in the Motif Atlas
- Geometric match to HL_5J7L_178
- Geometric discrepancy: 0.0869
- The information below is about HL_5J7L_178
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_01962.2
- Basepair signature
- cWW-tWH-tWH-F
- Number of instances in this motif group
- 6
Unit IDs
6WNW|1|4|U|1905
6WNW|1|4|U|1906
6WNW|1|4|U|1907
6WNW|1|4|A|1908
6WNW|1|4|U|1909
6WNW|1|4|U|1910
6WNW|1|4|A|1911
6WNW|1|4|A|1912
6WNW|1|4|A|1913
6WNW|1|4|A|1914
6WNW|1|4|A|1915
Current chains
- Chain 4
- 23s-5s joint ribosomal RNA
Nearby chains
- Chain D
- 50S ribosomal protein L34
- Chain b
- 50S ribosomal protein L2
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