HL_6WNW_081
3D structure
- PDB id
- 6WNW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GUAACUAUAAC
- Length
- 11 nucleotides
- Bulged bases
- 6WNW|1|4|A|2041
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6WNW_081 not in the Motif Atlas
- Geometric match to HL_5TBW_049
- Geometric discrepancy: 0.1763
- The information below is about HL_5TBW_049
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_84702.1
- Basepair signature
- cWW-F-F-tHW-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
6WNW|1|4|G|2038
6WNW|1|4|U|2039
6WNW|1|4|A|2040
6WNW|1|4|A|2041
6WNW|1|4|C|2042
6WNW|1|4|U|2043
6WNW|1|4|A|2044
6WNW|1|4|U|2045
6WNW|1|4|A|2046
6WNW|1|4|A|2047
6WNW|1|4|C|2048
Current chains
- Chain 4
- 23s-5s joint ribosomal RNA
Nearby chains
- Chain 1
- mRNA
- Chain 3
- Small subunit ribosomal RNA; SSU rRNA
- Chain 5
- Transfer RNA; tRNA
- Chain 7
- Transfer RNA; tRNA
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