HL_6WNW_090

3D structure

PDB id

6WNW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGACGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WNW_090 not in the Motif Atlas

Geometric match to HL_5J7L_190

Geometric discrepancy: 0.1246

The information below is about HL_5J7L_190

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

6WNW|1|4|U|2484
6WNW|1|4|G|2485
6WNW|1|4|A|2486
6WNW|1|4|C|2487
6WNW|1|4|G|2488
6WNW|1|4|G|2489

Current chains

Chain 4

23s-5s joint ribosomal RNA

Nearby chains

Chain E

50S ribosomal protein L35

Chain l

50S ribosomal protein L15

Chain w

50S ribosomal protein L27