HL_6WNW_100

3D structure

PDB id

6WNW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUUUAAG

Length

7 nucleotides

Bulged bases

6WNW|1|4|U|2925, 6WNW|1|4|A|2928

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WNW_100 not in the Motif Atlas

Geometric match to HL_7A0S_023

Geometric discrepancy: 0.3387

The information below is about HL_7A0S_023

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53890.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

15

Unit IDs

6WNW|1|4|C|2923
6WNW|1|4|U|2924
6WNW|1|4|U|2925
6WNW|1|4|U|2926
6WNW|1|4|A|2927
6WNW|1|4|A|2928
6WNW|1|4|G|2929

Current chains

Chain 4

23s-5s joint ribosomal RNA

Nearby chains