HL_6WOO_004

3D structure

PDB id

6WOO (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDP

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGACCCUUUGGAAG

Length

14 nucleotides

Bulged bases

6WOO|1|2|U|193

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WOO|1|2|C|185
6WOO|1|2|G|186
6WOO|1|2|A|187
6WOO|1|2|C|188
6WOO|1|2|C|189
6WOO|1|2|C|190
6WOO|1|2|U|191
6WOO|1|2|U|192
6WOO|1|2|U|193
6WOO|1|2|G|194
6WOO|1|2|G|195
6WOO|1|2|A|196
6WOO|1|2|A|197
6WOO|1|2|G|198

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain II

eS8