HL_6WOO_016

3D structure

PDB id

6WOO (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDP

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UGGCCGGUCGAUUUUCCA

Length

18 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WOO|1|2|U|649
6WOO|1|2|G|650
6WOO|1|2|G|651
6WOO|1|2|C|652
6WOO|1|2|C|653
6WOO|1|2|G|654
6WOO|1|2|G|655
6WOO|1|2|U|656
6WOO|1|2|C|657
6WOO|1|2|G|676
6WOO|1|2|A|677
6WOO|1|2|U|678
6WOO|1|2|U|679
6WOO|1|2|U|680
6WOO|1|2|U|681
6WOO|1|2|C|682
6WOO|1|2|C|683
6WOO|1|2|A|684

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain JJ

uS4