HL_6WOO_017

3D structure

PDB id

6WOO (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDP

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUCCUUGUGGC

Length

11 nucleotides

Bulged bases

6WOO|1|2|C|716, 6WOO|1|2|U|721

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WOO|1|2|G|714
6WOO|1|2|U|715
6WOO|1|2|C|716
6WOO|1|2|C|717
6WOO|1|2|U|718
6WOO|1|2|U|719
6WOO|1|2|G|720
6WOO|1|2|U|721
6WOO|1|2|G|722
6WOO|1|2|G|723
6WOO|1|2|C|724

Current chains

Chain 2

18S ribosomal RNA

Nearby chains