HL_6WOO_063

3D structure

PDB id

6WOO (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDP

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUCGAAAUGACC

Length

12 nucleotides

Bulged bases

6WOO|1|5|A|1025, 6WOO|1|5|U|1028

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WOO|1|5|G|1021
6WOO|1|5|U|1022
6WOO|1|5|C|1023
6WOO|1|5|G|1024
6WOO|1|5|A|1025
6WOO|1|5|A|1026
6WOO|1|5|A|1027
6WOO|1|5|U|1028
6WOO|1|5|G|1029
6WOO|1|5|A|1030
6WOO|1|5|C|1031
6WOO|1|5|C|1032

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain J

uL5

Chain PP

uS19

Chain SS

uS13