HL_6WQN_045
3D structure
- PDB id
- 6WQN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, contezolid
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UUUAUCAAAAA
- Length
- 11 nucleotides
- Bulged bases
- 6WQN|1|1|A|1807, 6WQN|1|1|U|1808, 6WQN|1|1|C|1809, 6WQN|1|1|A|1813
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6WQN_045 not in the Motif Atlas
- Homologous match to HL_4WF9_043
- Geometric discrepancy: 0.1451
- The information below is about HL_4WF9_043
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87681.1
- Basepair signature
- cWW-cWW-tWH-F-tWH-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
6WQN|1|1|U|1804
6WQN|1|1|U|1805
6WQN|1|1|U|1806
6WQN|1|1|A|1807
6WQN|1|1|U|1808
6WQN|1|1|C|1809
6WQN|1|1|A|1810
6WQN|1|1|A|1811
6WQN|1|1|A|1812
6WQN|1|1|A|1813
6WQN|1|1|A|1814
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain B
- 50S ribosomal protein L2
- Chain P
- 50S ribosomal protein L34
Coloring options: