HL_6WQN_050

3D structure

PDB id

6WQN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, contezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUGAAGAUGC

Length

10 nucleotides

Bulged bases

6WQN|1|1|A|2057, 6WQN|1|1|A|2058, 6WQN|1|1|G|2059

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WQN_050 not in the Motif Atlas

Homologous match to HL_7RQB_050

Geometric discrepancy: 0.1694

The information below is about HL_7RQB_050

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_90642.6

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

6

Unit IDs

6WQN|1|1|G|2054
6WQN|1|1|U|2055
6WQN|1|1|G|2056
6WQN|1|1|A|2057
6WQN|1|1|A|2058
6WQN|1|1|G|2059
6WQN|1|1|A|2060
6WQN|1|1|U|2061
6WQN|1|1|G|2062
6WQN|1|1|C|2063

Current chains

Chain 1

23S rRNA

Nearby chains

Chain L

50S ribosomal protein L3

Chain N

50S ribosomal protein L32