HL_6WQN_067

3D structure

PDB id

6WQN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, contezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

6WQN|1|1|U|2821, 6WQN|1|1|C|2822, 6WQN|1|1|G|2823

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WQN_067 not in the Motif Atlas

Geometric match to HL_8C3A_022

Geometric discrepancy: 0.3537

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

6WQN|1|1|C|2819
6WQN|1|1|U|2820
6WQN|1|1|U|2821
6WQN|1|1|C|2822
6WQN|1|1|G|2823
6WQN|1|1|G|2824

Current chains

Chain 1

23S rRNA

Nearby chains