HL_6WQQ_010

3D structure

PDB id

6WQQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, radezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CAAAG

Length

5 nucleotides

Bulged bases

6WQQ|1|1|A|364, 6WQQ|1|1|A|365

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WQQ_010 not in the Motif Atlas

Homologous match to HL_7RQB_011

Geometric discrepancy: 0.105

The information below is about HL_7RQB_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_70546.1

Basepair signature

cWW-F

Number of instances in this motif group

18

Unit IDs

6WQQ|1|1|C|362
6WQQ|1|1|A|363
6WQQ|1|1|A|364
6WQQ|1|1|A|365
6WQQ|1|1|G|366

Current chains

Chain 1

23S rRNA

Nearby chains

Chain S

50S ribosomal protein L4