RNA 3D Hub //

6WQQ Hairpin, Internal, and multi-helix Junction Loop Motifs

Download loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_6WQQ_0011/1/67:74No text annotation
geometric
HL_4WF9_001
HL_86769.4
HL_6WQQ_0021/1/87:95Pseudoknot geometry
homologous
HL_4WF9_002
HL_77600.2
HL_6WQQ_0031/1/122:127No text annotation
homologous
HL_4WF9_003
HL_75660.5
HL_6WQQ_0041/1/136:143GNRA wlth tandem sheared
homologous
HL_4WF9_004
HL_81538.2
HL_6WQQ_0051/1/158:170No text annotation
HL_6WQQ_0061/1/197:204No text annotation
geometric
HL_7RQB_006
NA
HL_6WQQ_0071/1/228:233No text annotation
homologous
HL_4WF9_007
HL_53890.2
HL_6WQQ_0081/1/249:255No text annotation
homologous
HL_5J7L_141
HL_37369.2
HL_6WQQ_0701/1/348:355T-loop with 1 bulged base
homologous
HL_7A0S_010
HL_01609.3
HL_6WQQ_0101/1/362:366No text annotation
homologous
HL_7RQB_011
NA
HL_6WQQ_0111/1/370:378T-loop with unstacked turn
homologous
HL_5J7L_144
HL_27670.2
HL_6WQQ_0751/1/428:438No text annotation
homologous
HL_5J7L_145
HL_91503.7
HL_6WQQ_0131/1/456:463Pseudoknot geometry
homologous
HL_5J7L_146
HL_30680.3
HL_6WQQ_0141/1/508:513GNRA
homologous
HL_4WF9_015
HL_37824.8
HL_6WQQ_0151/1/533:538GNRA
homologous
HL_4WF9_016
HL_37824.8
HL_6WQQ_0161/1/587:594No text annotation
homologous
HL_4WF9_017
HL_50318.1
HL_6WQQ_0171/1/609:618T-loop with 2 stacked bulged bases
homologous
HL_4WF9_018
HL_28252.9
HL_6WQQ_0181/1/655:661No text annotation
geometric
HL_8C3A_054
NA
HL_6WQQ_0191/1/674:679GNRA
homologous
HL_7RQB_020
NA
HL_6WQQ_0201/1/686:692No text annotation
homologous
HL_7RQB_021
NA
HL_6WQQ_0211/1/757:764GNRA wlth tandem sheared
homologous
HL_5J7L_154
HL_81538.2
HL_6WQQ_0221/1/789:798No text annotation
homologous
HL_4WF9_023
HL_88205.2
HL_6WQQ_0231/1/824:830No text annotation
homologous
HL_4WF9_024
HL_87954.2
HL_6WQQ_0241/1/871:876No text annotation
homologous
HL_7RQB_025
NA
HL_6WQQ_0261/1/999:1006GNRA
homologous
HL_4WF9_027
HL_37824.8
HL_6WQQ_0271/1/1022:1029No text annotation
homologous
HL_5J7L_160
HL_42998.2
HL_6WQQ_0291/1/1213:1219No text annotation
HL_6WQQ_0301/1/1260:1265GNRA
homologous
HL_7A0S_031
HL_37824.8
HL_6WQQ_0311/1/1318:1326T-loop with 2 stacked bulged bases
homologous
HL_4WF9_032
HL_28252.9
HL_6WQQ_0321/1/1361:1367Pseudoknot geometry with 3' bulge
homologous
HL_4WF9_033
HL_57176.2
HL_6WQQ_0331/1/1400:1405GNRA
homologous
HL_5J7L_167
HL_37824.8
HL_6WQQ_0341/1/1426:1435No text annotation
homologous
HL_4WF9_035
HL_81545.2
HL_6WQQ_0351/1/1492:1506No text annotation
geometric
HL_4WF9_011
HL_75660.5
HL_6WQQ_0371/1/1612:1615Mini UNCG
homologous
HL_7A0S_039
HL_48778.2
HL_6WQQ_0381/1/1656:1663No text annotation
homologous
HL_4WF9_038
HL_89567.2
HL_6WQQ_0391/1/1673:1681GNRA with extra cWW
homologous
HL_4WF9_039
HL_20167.2
HL_6WQQ_0401/1/1735:1740UNCG
geometric
HL_4LFB_009
HL_34617.5
HL_6WQQ_0411/1/1762:1767No text annotation
homologous
HL_7RQB_043
NA
HL_6WQQ_0421/1/1779:1783No text annotation
homologous
HL_7A0S_044
HL_80709.3
HL_6WQQ_0431/1/1804:1814No text annotation
homologous
HL_4WF9_043
HL_01962.2
HL_6WQQ_0441/1/1833:1838GNRA related
homologous
HL_5J7L_179
HL_04783.2
HL_6WQQ_0451/1/1895:1900No text annotation
HL_6WQQ_0461/1/1937:1947No text annotation
HL_6WQQ_0471/1/1976:1984No text annotation
homologous
HL_5J7L_182
HL_20167.2
HL_6WQQ_0481/1/2054:2063No text annotation
homologous
HL_4WF9_047
HL_61996.3
HL_6WQQ_0491/1/2236:2242No text annotation
HL_6WQQ_0501/1/2275:2283No text annotation
homologous
HL_4WF9_049
HL_85367.2
HL_6WQQ_0511/1/2291:2303No text annotation
homologous
HL_4WF9_050
HL_91939.2
HL_6WQQ_0721/1/2329:2341No text annotation
HL_6WQQ_0521/1/2330:2340No text annotation
HL_6WQQ_0531/1/2351:2358Pseudoknot geometry
homologous
HL_5J7L_189
HL_93324.4
HL_6WQQ_0541/1/2382:2389GNRA with extra cWW
homologous
HL_4WF9_053
HL_04259.3
HL_6WQQ_0551/1/2401:2406GNRA
homologous
HL_4WF9_054
HL_37824.8
HL_6WQQ_0561/1/2431:2440No text annotation
homologous
HL_4WF9_055
HL_53454.2
HL_6WQQ_0571/1/2498:2506No text annotation
homologous
HL_4WF9_056
HL_32735.2
HL_6WQQ_0581/1/2555:2562No text annotation
homologous
HL_5J7L_194
HL_31585.4
HL_6WQQ_0591/1/2578:2584No text annotation
homologous
HL_7A0S_061
HL_30068.2
HL_6WQQ_0601/1/2621:2626GNRA
homologous
HL_5J7L_196
HL_37824.8
HL_6WQQ_0611/1/2679:2695No text annotation
HL_6WQQ_0621/1/2728:2733Ribsomal LSU H95
homologous
HL_4WF9_061
HL_65794.5
HL_6WQQ_0631/1/2772:2786No text annotation
homologous
HL_4WF9_062
HL_74055.2
HL_6WQQ_0641/1/2819:2824No text annotation
HL_6WQQ_0651/1/2839:2847No text annotation
homologous
HL_4WF9_064
HL_64690.6
HL_6WQQ_0661/1/2876:2881GNRA
homologous
HL_7RQB_069
NA
HL_6WQQ_0671/2/36:42No text annotation
homologous
HL_4V9F_071
HL_47787.2
HL_6WQQ_0681/2/77:92No text annotation

Problematic loops

#loop idProblemSequence
HL_6WQQ_069No text annotation
HL_6WQQ_009No text annotation
HL_6WQQ_071No text annotation
HL_6WQQ_012No text annotation
HL_6WQQ_025No text annotation
HL_6WQQ_028No text annotation
HL_6WQQ_036No text annotation
HL_6WQQ_073No text annotation
HL_6WQQ_074No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_6WQQ_0011/1/24:30,
1/1/555:561		Triple sheared with non-canonical cWW
homologous
IL_4WF9_001
IL_04021.2
IL_6WQQ_0021/1/36:37,
1/1/488:490		Single bulged A
homologous
IL_7RQB_002
NA
IL_6WQQ_0031/1/42:44,
1/1/480:483		Minor groove platform with extra cWW
homologous
IL_4WF9_003
IL_90351.1
IL_6WQQ_1011/1/56:76,
1/1/109:113		No text annotation
geometric
IL_5TBW_144
NA
IL_6WQQ_0041/1/81:85,
1/1/97:104		Kink-turn
homologous
IL_4WF9_004
IL_01488.3
IL_6WQQ_0051/1/152:153,
1/1/175:177		Single bulged A
homologous
IL_4WF9_006
IL_31462.7
IL_6WQQ_0061/1/186:187,
1/1/215:217		Single stack bend
homologous
IL_4WF9_007
IL_90729.1
IL_6WQQ_0071/1/190:197,
1/1/204:212		9x8 Sarcin-Ricin; G-bulge
homologous
IL_4WF9_008
IL_84694.2
IL_6WQQ_0081/1/241:248,
1/1/256:262		8x7 Sarcin-Ricin; G-bulge
homologous
IL_4WF9_009
IL_04346.10
IL_6WQQ_1161/1/305:307,
1/1/408:412		No text annotation
IL_6WQQ_0091/1/328:331,
1/1/395:399		No text annotation
IL_6WQQ_0101/1/336:338,
1/1/386:390		No text annotation
homologous
IL_4WF9_014
IL_69440.3
IL_6WQQ_0111/1/527:530,
1/1/541:554		No text annotation
homologous
IL_4WF9_015
IL_81516.2
IL_6WQQ_0121/1/581:584,
1/1/597:600		Double sheared
homologous
IL_4WF9_016
IL_09705.15
IL_6WQQ_0131/1/607:609,
1/1/618:620		No text annotation
geometric
IL_7RQB_015
NA
IL_6WQQ_0141/1/638:640,
1/1/705:707		Isolated non-canonical cWW pair
homologous
IL_4WF9_018
IL_07785.1
IL_6WQQ_0151/1/649:653,
1/1/663:667		AAA cross-strand stack
homologous
IL_4WF9_019
IL_66798.2
IL_6WQQ_0161/1/717:719,
1/1/851:853		No text annotation
geometric
IL_7RQB_017
NA
IL_6WQQ_0171/1/719:723,
1/1/844:851		tHW-tHW cross-strand stack
homologous
IL_4WF9_021
IL_54041.2
IL_6WQQ_0181/1/742:743,
1/1/808:810		Single bulged A
homologous
IL_4WF9_022
IL_31462.7
IL_6WQQ_0191/1/747:748,
1/1/773:775		Single bulged G
geometric
IL_4V9F_026
IL_00225.14
IL_6WQQ_0201/1/748:752,
1/1/769:773		Triple sheared
homologous
IL_4WF9_024
IL_50730.2
IL_6WQQ_0211/1/783:785,
1/1/802:803		Major groove platform
homologous
IL_4WF9_026
IL_48076.6
IL_6WQQ_0221/1/820:822,
1/1/832:836		Multiple bulged bases
homologous
IL_5J7L_265
IL_06549.2
IL_6WQQ_0231/1/882:883,
1/1/984:986		Single stack bend
homologous
IL_7RQB_024
NA
IL_6WQQ_1171/1/889:893,
1/1/975:978		No text annotation
homologous
IL_4WF9_029
IL_06300.1
IL_6WQQ_0251/1/894:896,
1/1/972:974		Isolated non-canonical cWW pair
geometric
IL_4WF9_083
IL_87907.2
IL_6WQQ_0261/1/897:898,
1/1/969:971		Single bulged U
geometric
IL_4V9F_013
IL_89505.4
IL_6WQQ_0271/1/901:907,
1/1/960:966		7x7 Sarcin-Ricin with intercalated A; G-bulge
homologous
IL_4WF9_031
IL_29198.2
IL_6WQQ_0281/1/907:908,
1/1/958:960		Minor groove platform
geometric
IL_4V9F_034
IL_51454.3
IL_6WQQ_0291/1/909:913,
1/1/954:957		C-loop with bulged stacked A's
homologous
IL_4WF9_033
IL_26222.2
IL_6WQQ_0301/1/1038:1040,
1/1/1203:1204		Single bulged C
homologous
IL_7RQB_035
NA
IL_6WQQ_0311/1/1042:1046,
1/1/1197:1201		UAA/GAN
homologous
IL_7A0S_033
IL_38507.2
IL_6WQQ_0321/1/1048:1055,
1/1/1194:1195		SSU/LSU pseudoknot
geometric
IL_5J7L_278
IL_41203.4
IL_6WQQ_0331/1/1055:1057,
1/1/1193:1194		Single bulged U
homologous
IL_5J7L_279
IL_89505.4
IL_6WQQ_0341/1/1062:1068,
1/1/1184:1188		Kink-turn related
geometric
IL_4WF9_039
IL_57188.5
IL_6WQQ_1051/1/1062:1074,
1/1/1168:1188		No text annotation
IL_6WQQ_0351/1/1068:1074,
1/1/1168:1184		No text annotation
geometric
IL_4WF9_040
IL_50715.3
IL_6WQQ_0361/1/1075:1078,
1/1/1165:1167		Isolated non-canonical cWW pair
homologous
IL_5J7L_282
IL_57744.1
IL_6WQQ_0371/1/1081:1083,
1/1/1160:1162		Isolated non-canonical cWW pair
homologous
IL_4WF9_042
IL_87907.2
IL_6WQQ_0381/1/1235:1237,
1/1/1285:1288		Isolated cWS basepair
homologous
IL_4WF9_044
IL_42997.3
IL_6WQQ_0391/1/1243:1245,
1/1/1277:1279		Isolated cWH basepair
homologous
IL_4WF9_045
IL_10167.6
IL_6WQQ_0401/1/1246:1253,
1/1/1272:1276		Kink-turn
homologous
IL_5J7L_288
IL_70923.9
IL_6WQQ_0411/1/1257:1259,
1/1/1266:1268		Intercalated cWW
homologous
IL_4WF9_047
IL_31737.3
IL_6WQQ_0421/1/1300:1307,
1/1/2038:2044		8x7 Sarcin-Ricin; G-bulge
homologous
IL_4WF9_048
IL_04346.10
IL_6WQQ_0431/1/1356:1360,
1/1/1368:1370		Major groove minor groove platform with tHH
homologous
IL_4WF9_050
IL_83150.2
IL_6WQQ_0441/1/1388:1392,
1/1/1413:1417		UAA/GAN
homologous
IL_5J7L_292
IL_89021.2
IL_6WQQ_0451/1/1394:1398,
1/1/1407:1411		tSH-tHW-tHS
homologous
IL_5J7L_293
IL_17136.7
IL_6WQQ_0461/1/1448:1451,
1/1/1631:1635		No text annotation
IL_6WQQ_0481/1/1461:1465,
1/1/1624:1627		Other IL
homologous
IL_4WF9_054
IL_99646.2
IL_6WQQ_1061/1/1468:1473,
1/1/1611:1621		No text annotation
IL_6WQQ_0491/1/1476:1480,
1/1/1604:1608		No text annotation
homologous
IL_4WF9_122
IL_67780.1
IL_6WQQ_0501/1/1481:1485,
1/1/1598:1603		No text annotation
IL_6WQQ_0511/1/1518:1523,
1/1/1557:1562		Double sheared; A in syn; two near cWW pairs
geometric
IL_4N0T_001
IL_71294.3
IL_6WQQ_0521/1/1695:1700,
1/1/2031:2033		No text annotation
homologous
IL_4WF9_062
IL_12566.4
IL_6WQQ_0531/1/1707:1709,
1/1/2022:2024		Isolated tWW turn
homologous
IL_5J7L_305
IL_67095.2
IL_6WQQ_0541/1/1710:1713,
1/1/2020:2021		Major groove platform; stack outside cWW
geometric
IL_7RQB_066
NA
IL_6WQQ_1071/1/1710:1718,
1/1/2017:2021		No text annotation
homologous
IL_4WF9_117
IL_22854.4
IL_6WQQ_0551/1/1713:1718,
1/1/2017:2020		Intercalated tWH
homologous
IL_4WF9_065
IL_76758.2
IL_6WQQ_0561/1/1730:1735,
1/1/1740:1746		tSH-tSH-tHH-tHS
homologous
IL_7RQB_068
NA
IL_6WQQ_0571/1/1755:1761,
1/1/1768:1774		No text annotation
homologous
IL_4WF9_118
NA
IL_6WQQ_0581/1/1797:1798,
1/1/2007:2009		Single bulged A
homologous
IL_5J7L_312
IL_31462.7
IL_6WQQ_0591/1/1825:1831,
1/1/1840:1848		Kink-turn related
homologous
IL_7RQB_070
NA
IL_6WQQ_0601/1/1864:1867,
1/1/1929:1930		Minor groove platform, major groove intercalation
homologous
IL_5J7L_314
IL_95583.2
IL_6WQQ_0611/1/1868:1869,
1/1/1925:1928		Major groove intercalation
homologous
IL_5J7L_315
IL_82107.5
IL_6WQQ_0621/1/1873:1876,
1/1/1920:1921		Major groove minor groove platform; mini C-loop
homologous
IL_5J7L_316
IL_68140.4
IL_6WQQ_1091/1/1878:1882,
1/1/1914:1918		UAA/GAN with extra pair
homologous
IL_4WF9_073
IL_89021.2
IL_6WQQ_0641/1/1883:1887,
1/1/1909:1913		Triple sheared
homologous
IL_7RQB_075
NA
IL_6WQQ_1101/1/1891:1894,
1/1/1901:1905		UAA/GAN variation
homologous
IL_5J7L_317
IL_77691.5
IL_6WQQ_0661/1/1960:1961,
1/1/1991:1994		Bulged stacked bases
homologous
IL_7RQB_076
NA
IL_6WQQ_0671/1/1961:1972,
1/1/1988:1991		No text annotation
geometric
IL_4WF9_077
IL_42218.2
IL_6WQQ_0681/1/2077:2079,
1/1/2644:2645		Major groove platform
homologous
IL_4WF9_078
IL_48076.6
IL_6WQQ_0691/1/2081:2084,
1/1/2638:2642		No text annotation
IL_6WQQ_0701/1/2094:2096,
1/1/2469:2470		Single bulged U
homologous
IL_7RQB_080
NA
IL_6WQQ_0711/1/2097:2098,
1/1/2465:2468		Minor groove platform
homologous
IL_7RQB_081
NA
IL_6WQQ_0721/1/2108:2110,
1/1/2263:2266		Isolated tHS basepair with bulges
homologous
IL_4WF9_082
IL_85599.2
IL_6WQQ_1181/1/2123:2125,
1/1/2218:2220		Isolated non-canonical cWW pair
geometric
IL_8CRE_446
IL_87907.2
IL_6WQQ_0741/1/2229:2231,
1/1/2247:2248		Single bulged U
homologous
IL_5J7L_331
IL_89505.4
IL_6WQQ_0751/1/2324:2326,
1/1/2344:2348		Isolated tHS basepair with bulges
homologous
IL_4WF9_086
IL_61476.2
IL_6WQQ_0761/1/2377:2380,
1/1/2391:2394		Double sheared
homologous
IL_5J7L_333
IL_09705.15
IL_6WQQ_0771/1/2428:2430,
1/1/2441:2442		Single bulged U
homologous
IL_4WF9_088
IL_89505.4
IL_6WQQ_0781/1/2480:2481,
1/1/2525:2527		Single stack bend
geometric
IL_4WF9_089
IL_26793.1
IL_6WQQ_0791/1/2481:2482,
1/1/2523:2525		Major groove platform
homologous
IL_4WF9_090
IL_48076.6
IL_6WQQ_1111/1/2484:2486,
1/1/2520:2521		Major groove platform
homologous
IL_7A0S_085
IL_48076.6
IL_6WQQ_0811/1/2486:2488,
1/1/2516:2520		Major groove minor groove platform with extra cWW
geometric
IL_7RQB_094
NA
IL_6WQQ_0821/1/2493:2497,
1/1/2507:2511		Triple sheared
homologous
IL_4WF9_093
IL_17948.2
IL_6WQQ_0831/1/2534:2536,
1/1/2606:2609		Major groove platform with extra pair
geometric
IL_7RQB_093
NA
IL_6WQQ_0841/1/2537:2539,
1/1/2601:2605		Isolated non-canonical cWW with bulges
homologous
IL_4WF9_095
IL_07785.1
IL_6WQQ_0851/1/2539:2540,
1/1/2598:2601		No text annotation
geometric
IL_4WF9_096
IL_42626.2
IL_6WQQ_0861/1/2549:2550,
1/1/2567:2570		Major groove platform with intercalation
homologous
IL_4WF9_097
IL_02555.1
IL_6WQQ_0871/1/2618:2619,
1/1/2628:2630		Single bulged A
homologous
IL_4WF9_098
IL_31462.7
IL_6WQQ_1191/1/2663:2667,
1/1/2801:2809		tSH-tHS-tHW
homologous
IL_4WF9_099
IL_04638.3
IL_6WQQ_0891/1/2707:2711,
1/1/2752:2754		C-loop
homologous
IL_4WF9_101
IL_63596.11
IL_6WQQ_0901/1/2714:2718,
1/1/2745:2749		No text annotation
homologous
IL_4WF9_102
IL_23774.1
IL_6WQQ_0911/1/2722:2723,
1/1/2738:2741		Multiple bulged bases
homologous
IL_5J7L_349
IL_42626.2
IL_6WQQ_0921/1/2764:2769,
1/1/2789:2794		UAA/GAN with extra cWW
homologous
IL_7RQB_107
NA
IL_6WQQ_1131/1/2857:2859,
1/1/2898:2901		Other IL
geometric
IL_7A0S_092
IL_08770.1
IL_6WQQ_0941/1/2863:2865,
1/1/2891:2894		No text annotation
homologous
IL_4WF9_107
IL_31531.3
IL_6WQQ_0951/1/2867:2872,
1/1/2885:2889		tHS double platform
homologous
IL_4WF9_108
IL_70411.2
IL_6WQQ_0961/2/2:4,
1/2/109:112		No text annotation
geometric
IL_4N0T_004
IL_99358.1
IL_6WQQ_0971/2/15:16,
1/2/63:65		Major groove intercalation
homologous
IL_4WF9_112
IL_31462.7
IL_6WQQ_0981/2/21:27,
1/2/53:58		No text annotation
IL_6WQQ_1201/2/28:29,
1/2/49:52		No text annotation
IL_6WQQ_1001/2/32:36,
1/2/42:46		Symmetric double minor groove platform
geometric
IL_5TBW_376
NA

Problematic loops

#loop idProblemSequence
IL_6WQQ_102No text annotation
IL_6WQQ_024No text annotation
IL_6WQQ_103Isolated cWS basepair
IL_6WQQ_104Isolated non-canonical cWW pair
IL_6WQQ_047No text annotation
IL_6WQQ_108No text annotation
IL_6WQQ_063No text annotation
IL_6WQQ_065No text annotation
IL_6WQQ_073Tandem non-canonical cWW pairs
IL_6WQQ_080Major groove platform with extra pair
IL_6WQQ_088No text annotation
IL_6WQQ_112No text annotation
IL_6WQQ_093Major groove platform with intercalation
IL_6WQQ_114No text annotation
IL_6WQQ_115No text annotation
IL_6WQQ_099No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_6WQQ_0011/1/30:31,
1/1/520:527,
1/1/554:555		No text annotation
homologous
J3_7RQB_001
NA
J3_6WQQ_0121/1/30:31,
1/1/520:530,
1/1/541:555		No text annotation
homologous
J3_4WF9_011
J3_92134.2
J3_6WQQ_0131/1/32:35,
1/1/491:507,
1/1/514:519		No text annotation
homologous
J3_4WF9_012
J3_30040.2
J3_6WQQ_0021/1/56:67,
1/1/74:76,
1/1/109:113		No text annotation
homologous
J3_4WF9_001
J3_47707.1
J3_6WQQ_0031/1/272:276,
1/1/295:302,
1/1/415:416		No text annotation
homologous
J3_7RQB_003
NA
J3_6WQQ_0141/1/300:302,
1/1/415:421,
1/1/445:450		No text annotation
J3_6WQQ_0151/1/340:344,
1/1/359:368,
1/1/380:384		No text annotation
homologous
J3_4WF9_015
J3_46299.2
J3_6WQQ_0041/1/728:734,
1/1/818:820,
1/1/836:839		No text annotation
homologous
J3_5J7L_038
J3_64189.2
J3_6WQQ_0051/1/743:745,
1/1/777:781,
1/1/805:808		No text annotation
homologous
J3_4WF9_003
J3_44724.7
J3_6WQQ_0061/1/1335:1340,
1/1/1669:1671,
1/1/1683:1686		No text annotation
homologous
J3_4WF9_004
J3_32852.6
J3_6WQQ_0071/1/1342:1346,
1/1/1649:1655,
1/1/1664:1667		No text annotation
homologous
J3_4WF9_005
J3_68164.1
J3_6WQQ_0161/1/1347:1351,
1/1/1375:1382,
1/1/1645:1648		No text annotation
J3_6WQQ_0081/1/2118:2120,
1/1/2223:2228,
1/1/2249:2255		No text annotation
homologous
J3_4WF9_007
J3_07703.1
J3_6WQQ_0201/1/2309:2311,
1/1/2411:2422,
1/1/2448:2454		No text annotation
homologous
J3_5J7L_070
J3_20992.1
J3_6WQQ_0091/1/2322:2324,
1/1/2348:2350,
1/1/2359:2364		No text annotation
homologous
J3_4WF9_008
J3_61124.2
J3_6WQQ_0211/1/2544:2547,
1/1/2572:2574,
1/1/2588:2594		No text annotation
homologous
J3_4WF9_009
J3_32601.5
J3_6WQQ_0111/1/2834:2835,
1/1/2851:2856,
1/1/2902:2906		No text annotation
homologous
J3_7A0S_013
J3_76911.2
J3_6WQQ_0191/2/5:14,
1/2/66:77,
1/2/92:108		No text annotation
J4_6WQQ_0011/1/271:276,
1/1/295:300,
1/1/450:452,
1/1/467:470		No text annotation
J4_6WQQ_0021/1/340:344,
1/1/359:362,
1/1/366:368,
1/1/380:384		No text annotation
homologous
J4_7A0S_002
J4_71729.5
J4_6WQQ_0031/1/644:647,
1/1/669:673,
1/1/680:684,
1/1/694:701		No text annotation
homologous
J4_4WF9_003
J4_60168.1
J4_6WQQ_0041/1/1308:1313,
1/1/1331:1332,
1/1/1689:1692,
1/1/2036:2037		No text annotation
homologous
J4_4WF9_004
J4_64571.5
J4_6WQQ_0051/1/1385:1387,
1/1/1418:1422,
1/1/1439:1442,
1/1/1641:1642		No text annotation
J4_6WQQ_0061/1/1799:1803,
1/1/1815:1819,
1/1/1854:1857,
1/1/2002:2006		No text annotation
homologous
J4_5J7L_025
J4_61477.5
J4_6WQQ_0071/1/1860:1863,
1/1/1931:1933,
1/1/1951:1960,
1/1/1994:1999		No text annotation
J4_6WQQ_0081/1/2312:2316,
1/1/2370:2374,
1/1/2397:2399,
1/1/2408:2410		No text annotation
homologous
J4_4WF9_008
J4_04930.6
J4_6WQQ_0101/1/2670:2673,
1/1/2701:2703,
1/1/2758:2762,
1/1/2796:2798		No text annotation
homologous
J4_5J7L_028
J4_77044.4
J5_6WQQ_0081/1/47:54,
1/1/115:120,
1/1/129:130,
1/1/149:151,
1/1/178:180		No text annotation
homologous
J5_4WF9_001
J5_01737.2
J5_6WQQ_0021/1/271:276,
1/1/295:302,
1/1/415:421,
1/1/445:452,
1/1/467:470		No text annotation
J5_6WQQ_0031/1/576:578,
1/1/603:607,
1/1/620:622,
1/1/1299:1300,
1/1/2044:2045		No text annotation
homologous
J5_4WF9_003
J5_43153.5
J5_6WQQ_0041/1/627:632,
1/1/713:716,
1/1/854:857,
1/1/1234:1235,
1/1/1288:1294		No text annotation
homologous
J5_4WF9_004
J5_74302.5
J5_6WQQ_0051/1/1718:1726,
1/1/1750:1751,
1/1/1778:1779,
1/1/1783:1791,
1/1/2015:2017		No text annotation
homologous
J5_4WF9_005
J5_62523.6
J5_6WQQ_0061/1/2084:2091,
1/1/2473:2480,
1/1/2527:2534,
1/1/2609:2615,
1/1/2633:2638		No text annotation
J5_6WQQ_0091/1/2101:2104,
1/1/2270:2273,
1/1/2285:2286,
1/1/2308:2309,
1/1/2454:2462		No text annotation
homologous
J5_4WF9_007
J5_39529.1
J6_6WQQ_0031/1/45:46,
1/1/181:186,
1/1/217:227,
1/1/234:238,
1/1/265:269,
1/1/472:479		No text annotation
J6_6WQQ_0041/1/2101:2104,
1/1/2270:2273,
1/1/2285:2286,
1/1/2308:2311,
1/1/2411:2422,
1/1/2448:2462		No text annotation
J6_6WQQ_0021/1/2101:2105,
1/1/2269:2273,
1/1/2285:2286,
1/1/2308:2311,
1/1/2411:2423,
1/1/2447:2462		No text annotation
J7_6WQQ_0011/1/8:15,
1/1/570:576,
1/1/2045:2050,
1/1/2067:2070,
1/1/2652:2657,
1/1/2815:2831,
1/1/2909:2914		No text annotation
J7_6WQQ_0031/1/862:867,
1/1/880:881,
1/1/987:990,
1/1/1015:1020,
1/1/1031:1035,
1/1/1207:1208,
1/1/1224:1229		No text annotation

Problematic loops

#loop idProblemSequence
J3_6WQQ_017No text annotation
J3_6WQQ_010No text annotation
J3_6WQQ_018No text annotation
J4_6WQQ_009No text annotation
J5_6WQQ_001No text annotation
J5_6WQQ_007No text annotation
J6_6WQQ_001No text annotation
J7_6WQQ_002No text annotation

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