HL_6WRS_025

3D structure

PDB id

6WRS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, tedizolid

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GACGAGCGAAUU

Length

12 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WRS_025 not in the Motif Atlas

Geometric match to HL_8C3A_006

Geometric discrepancy: 0.2596

The information below is about HL_8C3A_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

6WRS|1|1|G|919
6WRS|1|1|A|920
6WRS|1|1|C|921
6WRS|1|1|G|922
6WRS|1|1|A|923
6WRS|1|1|G|924
6WRS|1|1|C|943
6WRS|1|1|G|944
6WRS|1|1|A|945
6WRS|1|1|A|946
6WRS|1|1|U|947
6WRS|1|1|U|948

Current chains

Chain 1

23S rRNA

Nearby chains

Chain Y

50S ribosomal protein L16